BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F01LP1|AL426549
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1594 1574 0.0
>3x_Contig1594
Length = 9813
Score = 1574 bits (792), Expect = 0.0
Identities = 804/809 (99%), Gaps = 1/809 (0%)
Strand = Plus / Minus
Query: 1 aatgaaaaattaatgatctatcagaaatcatggagaaagaaagaaagaaaagtaaaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9636 aatgaaaaattaatgatctatcagaaatcatggagaaagaaagaaagaaaagtaaaagcc 9577
Query: 61 aaccaaccgccagcttctctattcaagccttcttcttttcatatcatctggttgtaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9576 aaccaaccgccagcttctctattcaagccttcttcttttcatatcatctggttgtaactc 9517
Query: 121 agtgttaggagaagccatcgacgatccgttcgacttatactttcttttcttcgttttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9516 agtgttaggagaagccatcgacgatccgttcgacttatactttcttttcttcgttttggt 9457
Query: 181 acctgtaccgtttagatcgaatgcaagatcatccacatcgaaaccagaatttttaaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9456 acctgtaccgtttagatcgaatgcaagatcatccacatcgaaaccagaatttttaaactc 9397
Query: 241 tgacggatggctacttcatcaactgccctatcactgtagagcacatatcccaatccattt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9396 tgacggatggct-cttcatcaactgccctatcactgtagagcacatatcccaatccattt 9338
Query: 301 gtggcggctcaaataatcctgtatctcttttcatcatcgcgtctctatactcttcttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9337 gtggcggctcaaataatcctgtatctcttttcatcatcgcgtctctatactcttcttcac 9278
Query: 361 tcatcccttccactagtttggcttgattcatcatatccggattattttgaragattacgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9277 tcatcccttccactagtttggcttgattcatcatatccggattattttgaaagattacgt 9218
Query: 421 ctgatatctctccaccttttccgttttcccttgaaggaattgttataaaccttcctgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9217 ctgatatctctccaccttttccgttttcccttgaaggaattgttataaaccttcctgaaa 9158
Query: 481 gatcttgtatctggttcttgtaagatttccttagtttaaccgctttcgtaccatctgcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9157 gatcttgtatctggttcttgtaagatttccttagtttaaccgctttcgtaccatctgcat 9098
Query: 541 tcgtcctagccacctgcctagccacctcttctaaaccataaatcgttattaaatcgtcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9097 tcgtcctagccacctgcctagccacctcttctaaaccataaatcgttattaaatcgtcta 9038
Query: 601 ccggattcggttgttgtgattcgtaaacaggaagtgacggatccacataataatratagt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 9037 ccggattcggttgttgtgattcgtaaacaggaagtgacggatccacataataataatagt 8978
Query: 661 kcgggtgcgtggcactaccatcttcgtgactcgtagccattttgtctaagttcactgtgt 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8977 tcgggtgcgtggcactaccatcttcgtgactcgtagccattttgtctaagttcactgtgt 8918
Query: 721 attgtttaaccttgttttgttgccttgtttgtatttggaaagttgctaatttganactct 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8917 attgtttaaccttgttttgttgccttgtttgtatttggaaagttgctaatttgaaactct 8858
Query: 781 cactatctattaggacttattctataatc 809
|||||||||||||||||||||||||||||
Sbjct: 8857 cactatctattaggacttattctataatc 8829
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6445
Number of Sequences: 1807
Number of extensions: 6445
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)